1 General Purpose
Cox regression assesses time to events,
like death or cure, and the effects of predictors like comorbidity
and frailty. If a predictor is not significant, then time-dependent
Cox regression may be a relevant approach. It assesses whether the
predictor interacts with time. Time dependent Cox has been
explained in Chap. 56. The current chapter explains
segmented time-dependent Cox regression. This method goes one step
further and assesses, whether the interaction with time is
different at different periods of the study.
2 Schematic Overview of Type of Data File

3 Primary Scientific Question
Primary question: is frailty a
time-dependently changing variable in patients admitted to hospital
for exacerbation of chronic obstructive pulmonary disease
(COPD).
4 Data Example
A simulated data file of 60 patients
admitted to hospital for exacerbation of COPD is given underneath.
All of the patients are assessed for frailty scores once a week.
The frailty scores run from 0 to 100 (no frail to very frail)



The above table gives the first 42
patients of 60 patients assessed for their frailty scores after 1,
2 and 3 weeks of clinical treatment. It can be observed that
in the first week frailty scores at discharge were 15–20, in the
second week 15–32, and in the third week 14–24. Patients with
scores over 32 were never discharged. Frailty scores were probably
a major covariate of time to discharge. The entire data file is in
extras.springer.com, and is entitled “chapter57segmentedcox”. We
will first perform a simple time dependent Cox regression. Start by
opening the data file in SPSS.
5 Simple Time Dependent Cox Regression
For analysis the statistical model Cox
Time Dependent in the module Survival is required.
Command:
-
Analyze….Survival….Cox w/Time-Dep Cov….Compute Time-Dep Cov….Time (T_); transfer to box Expression for T_Cov….add the sign *….add the frailty variable third week….Model….Time: day of discharge….Status: cured or lost….Define: cured = 1….Continue….T_Cov: transfer to Covariates….click OK.
Variables in the equation
B
|
SE
|
Wald
|
df
|
Sig.
|
Exp(B)
|
|
---|---|---|---|---|---|---|
T_COV_
|
,000
|
,001
|
,243
|
1
|
,622
|
1,000
|
The above table shows the result:
frailty is not a significant predictor of day of discharge.
However, patients are generally not discharged from hospital until
they are non-frail at a reasonable level, and this level may be
obtained at different periods of time. Therefore, a segmented time
dependent Cox regression may be more adequate for analyzing these
data.
6 Segmented Time Dependent Cox Regression
For analysis the statistical model Cox
Time Dependent in the module Survival is again required.
Command:
-
Survival…..Cox w/Time-Dep Cov….Compute Time-Dependent Covariate….
-
Expression for T_COV_: enter (T_ > = 1 & T_ < 11) * VAR00004 + (T_ > = 11 & T_ < 21) * VAR00005 + (T_ > = 21 & T_ < 31)….Model….Time: enter Var 1….Status: enter Var 2 (Define events enter 1)….Covariates: enter T_COV_ ....click OK).
Variables in the equation
B
|
SE
|
Wald
|
df
|
Sig.
|
Exp(B)
|
|
---|---|---|---|---|---|---|
T_COV_
|
−,056
|
,009
|
38,317
|
1
|
,000
|
,945
|
The above table shows that the
independent variable, segmented frailty variable T_COV_, is,
indeed, a very significant predictor of the day of discharge. We
will, subsequently, perform a multiple segmented time dependent Cox
regression with treatment modality as second predictor
variable.
7 Multiple Segmented Time Dependent Cox Regression
Command:
-
same commands as above, except for Covariates: enter T_COV and treatment….click OK.
Variables in the equation
B
|
SE
|
Wald
|
df
|
Sig.
|
Exp(B)
|
|
---|---|---|---|---|---|---|
T_COV_
|
−,060
|
,009
|
41,216
|
1
|
,000
|
,942
|
VAR00003
|
,354
|
,096
|
13,668
|
1
|
,000
|
1,424
|
The above table shows that both the
frailty (variable T_COV_) and treatment (variable 3) are very
significant predictors of the day of discharge with hazard ratios
of 0,942 and 1,424. The new treatment is about 1,4 times better and
the patients are doing about 0,9 times worse per frailty score
point. If treatment is used as a single predictor unadjusted for
frailty, then it is no longer a significant factor.
Command:
-
Analyze….Survival….Cox regression…. Time: day of discharge ….Status: cured or lost….Define: cured = 1….Covariates: treatment….click OK.
Variables in the equation
B
|
SE
|
Wald
|
df
|
Sig.
|
Exp(B)
|
|
---|---|---|---|---|---|---|
VAR00003
|
,131
|
,072
|
3,281
|
1
|
,070
|
1,140
|
The p-value of treatment (variable 3)
has risen from p = 0,0001 to 0,070. Probably, frailty has a
confounding effect on treatment efficacy, and after adjustment for
it the treatment effect is, all of a sudden, a very significant
factor.
8 Conclusion
Cox regression assesses time to
events, like death or cure, and the effects on it of predictors
like treatment efficacy, comorbidity, and frailty. If a predictor
is not significant, then time dependent Cox regression may be a
relevant approach. It assess whether the time-dependent predictor
interacts with time. Time dependent Cox has been explained in Chap.
56. The current chapter explains
segmented time dependent Cox regression. This method goes one step
further and assesses whether the interaction with time is different
at different periods of the study. It is shown that a treatment
variable may be confounded with time dependent factors and that
after adjustment for it a statistically significant treatment
efficacy can be demonstrated.
9 Note
More background, theoretical and
mathematical information of segmented Cox regression is given in
Statistics applied to clinical studies 5th edition, Chap. 31,
Springer Heidelberg Germany, 2012, from the same authors.